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Mega-Environment Identification for Barley Based on Twenty-Seven Years of Global Grain Yield Data
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Mega-Environment Identification for Barley Based on Twenty-Seven Years of Global Grain Yield Data
- Eduardo Hernandez-Segundo,
- Flavio Capettini,
- Richard Trethowan,
- Maarten van Ginkel,
- Apolinar Mejia,
- Aquiles Carballo,
- Jose Crossa,
- Mateo Vargas,
- Artemio Balbuena-Melgarejo,
- Volume 50Issue 1Crop Science
- pages: 438-438
- First Published online: January 1, 2010
Corresponding Author
Eduardo Hernandez-Segundo
International Maize and Wheat Improvement Center (CIMMYT), Apdo. Postal 6-641, 06600 Mexico, DF, Mexico
Corresponding author ([email protected]).Search for more papers by this authorFlavio Capettini
International Center for Agricultural Research in the Dry Areas (ICARDA), P.O. Box 5466, Aleppo, Syrian Arab Republic
Search for more papers by this authorRichard Trethowan
Sydney Univ., Plant Breeding Institute PMB 11, Camden, NSW, 2570 Australia
Search for more papers by this authorMaarten van Ginkel
International Center for Agricultural Research in the Dry Areas (ICARDA), P.O. Box 5466, Aleppo, Syrian Arab Republic
Search for more papers by this authorApolinar Mejia
Colegio de Posgraduados, Km. 36.5 Carretera Mexico-Texcoco, Montecillo, Eestado de México, C. P. 56230 95
Search for more papers by this authorAquiles Carballo
Colegio de Posgraduados, Km. 36.5 Carretera Mexico-Texcoco, Montecillo, Eestado de México, C. P. 56230 95
Search for more papers by this authorJose Crossa
International Maize and Wheat Improvement Center (CIMMYT), Apdo. Postal 6-641, 06600 Mexico, DF, Mexico
Search for more papers by this authorMateo Vargas
International Maize and Wheat Improvement Center (CIMMYT), Apdo. Postal 6-641, 06600 Mexico, DF, Mexico
Search for more papers by this authorArtemio Balbuena-Melgarejo
Universidad Autonoma del Estado de Mexico, Carretera Toluca-Ixtlahuaca, Toluca, Estado de Mexico, Mexico
Search for more papers by this authorCorresponding Author
Eduardo Hernandez-Segundo
International Maize and Wheat Improvement Center (CIMMYT), Apdo. Postal 6-641, 06600 Mexico, DF, Mexico
Corresponding author ([email protected]).Search for more papers by this authorFlavio Capettini
International Center for Agricultural Research in the Dry Areas (ICARDA), P.O. Box 5466, Aleppo, Syrian Arab Republic
Search for more papers by this authorRichard Trethowan
Sydney Univ., Plant Breeding Institute PMB 11, Camden, NSW, 2570 Australia
Search for more papers by this authorMaarten van Ginkel
International Center for Agricultural Research in the Dry Areas (ICARDA), P.O. Box 5466, Aleppo, Syrian Arab Republic
Search for more papers by this authorApolinar Mejia
Colegio de Posgraduados, Km. 36.5 Carretera Mexico-Texcoco, Montecillo, Eestado de México, C. P. 56230 95
Search for more papers by this authorAquiles Carballo
Colegio de Posgraduados, Km. 36.5 Carretera Mexico-Texcoco, Montecillo, Eestado de México, C. P. 56230 95
Search for more papers by this authorJose Crossa
International Maize and Wheat Improvement Center (CIMMYT), Apdo. Postal 6-641, 06600 Mexico, DF, Mexico
Search for more papers by this authorMateo Vargas
International Maize and Wheat Improvement Center (CIMMYT), Apdo. Postal 6-641, 06600 Mexico, DF, Mexico
Search for more papers by this authorArtemio Balbuena-Melgarejo
Universidad Autonoma del Estado de Mexico, Carretera Toluca-Ixtlahuaca, Toluca, Estado de Mexico, Mexico
Search for more papers by this authorAll rights reserved. No part of this periodical may be reproduced or transmitted in any form or by any means, electronic or mechanical, including photocopying, recording, or any information storage and retrieval system, without permission in writing from the publisher. Permission for printing and for reprinting the material contained herein has been obtained by the publisher.
ABSTRACT
Knowledge of target environments in breeding programs is important to better direct the development of germplasm. The objectives of this study were to identify associations among barley (Hordeum vulgare L.) growing environments to identify mega-environments to select the best locations to breed barley. Twenty-seven years of grain yield data from the International Barley Yield Trial (IBYT) conducted by the ICARDA-CIMMYT Barley Breeding Program, consisting of 750 grain yield trials of two replications representing 235 locations in 75 countries, were analyzed using pattern analysis to group sites across years that represent similar selection environments. The shifted multiplicative model (SHMM) was employed to group sites within each year. Environments clustered into three main groups and squared Euclidean distances were used to identify a representative location within each cluster. Group 1 locations were characterized as being cool with intermediate precipitation; Group 2 locations were warmer and drier; and Group 3 sites were generally cool and had the highest average precipitation. The respective representative key locations for each of the three groups were Leida, Spain; Boulifa, Tunisia; and Setif, Algeria. All three key locations are located in the Northern Hemisphere between 36° and 41° latitude. The results of this study show that the global adaptation of barley is possible and can be improved by breeding and selection for adaptation within the three main mega-environments identified.
References
- Abdalla, O.S., Crossa, J., Autrique, E., and De Lacy, I.H. Relationships among international testing sites of spring durum wheat. Crop Sci. 1996 36 33–40 https://doi.org/10.2135/cropsci1996.0011183X003600010006x http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=A1996TN28200006&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
- Abdalla, O.S., Crossa, J., and Cornelius, P.L. Results and biological interpretation of shifted multiplicative model clustering of durum wheat cultivars and test sites. Crop Sci. 1997 37 88–97 https://doi.org/10.2135/cropsci1997.0011183X003700010014x http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=A1997WE97700014&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
- Abeledo, L.G., Calderini, D.F., and Slafer, G.A. Genetic improvement of barley yield potential and its physiological determinants in Argentina (1944–1998). Euphytica 2003 130 325–334 https://doi.org/10.1023/A:1023089421426 http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000181981000003&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
- Azzalini, A., and Cox, D.R. Two new tests associated with the analysis of variance. J. R. Stat. Soc. Ser. B 1984 46 335–343
- Badr, A., Muller, K., Schafer-Pregl, R., El Rabey, H., Effgen, S., Ibrahim, H., Pozzi, C., Rohde, W., and Salamini, F. On the origin and domestication history of barley (Hordeum vulgare). Mol. Biol. Evol. 2000 17 499–510 http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000086337700004&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
- Barreto, H.J., Edmeades, G.O., Chapman, S.C., and Crossa, J. The alpha lattice design in plant breeding and agronomy: Generation and analysis. p. 544–551. G.O. Edmeades et al. (ed.) Proceedings of a Symposium on Developing Drought- and Low N-Tolerant Maize, El Batan, Mexico. 25–29 Mar. 1996. CIMMYT, Mexico City, Mexico. 1997
- Bedggood, W., and Bedggood, A. Victorian winter crop summary 2003. Dep. of Primary Industries, Melbourne, Australia. 2003
- Braun, H.J., Rajaram, S., and van Ginkel, M. CIMMYT's approach to breeding for wide adaptation. Euphytica 1996 92 175–183 https://doi.org/10.1007/BF00022843 http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=A1996VT61200023&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
- Brown, K.D., Sorrels, M.E., and Coffman, W.R. A method for classification and evaluation of testing environments. Crop Sci. 1983 23 889–893 https://doi.org/10.2135/cropsci1983.0011183X002300050018x http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=A1983RP45100017&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
- Calhoun, D.S., Gebeyehu, G., Miranda, A., Rajaram, S., and van Ginkel, M. Choosing evaluation environments to increase wheat grain yield under drought. Crop Sci. 1994 34 673–678 https://doi.org/10.2135/cropsci1994.0011183X003400030014x http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=A1994NK22500014&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
- Ceccarelli, S., Grando, S., and Impiglia, A. Choice of selection strategy in breeding barley for stress environments. Euphytica 1998 103 307–318 https://doi.org/10.1023/A:1018647001429 http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000076445500005&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
- Cornelius, P.L., Seyedsadr, M., and Crossa, J. Using the shifted multiplicative model to search for “separability” in crop cultivar trials. Theor. Appl. Genet. 1992 84 161–172 http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=A1992JC07000024&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
- Crossa, J., and Cornelius, P.L. Site regression and shifted multiplicative models clustering of cultivar trials sites under heterogeneity of error variances. Crop Sci. 1997 37 406–415 https://doi.org/10.2135/cropsci1997.0011183X003700020017x http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=A1997WU90500017&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
- Crossa, J., Cornelius, P.L., and Seyedsadr, M.S. Using the shifted multiplicative model cluster methods for crossover genotype-by-environment interaction. p. 175–198. M.S. Kang, and H.G. Gauch (ed.) Genotype-by-environment interaction. CRC Press, Boca Raton, FL. 1996
- Crossa, J., Cornelius, P.L., Seyedsadr, M., and Byrne, P. A shifted multiplicative model cluster analysis for grouping environments without genotypic rank change. Theor. Appl. Genet. 1993 85 577–586 http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=A1993KH04900012&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
- De Lacy, I.H., and Cooper, M. Pattern analysis for the analysis of regional variety trials. p. 301–334. M.S. Kang (ed.) Genotype-by-environment interaction and plant breeding. Louisiana State Univ., Baton Rouge, LA. 1990
- De Lacy, I.H., Cooper, M., Basford, K.E., and Fox, P.N. The SEQRET package. Computer programs for retrospective pattern. p. 39. Plant improvement group research report no. 1. School of Land and Food, The Univ. of Queensland, Brisbane, Australia. 1998
- De Lacy, I.H., and Lawrence, P. Combining pattern analysis over years: Classification of locations. p. 175–176. K.S. McWhirter et al. (ed.) Proc. of the Ninth Australian Plant Breeding Conf., Wagga Wagga, NSW, Australia. 17 June−1 July 1988. Agricultural Research Inst., Wagga Wagga, NSW, Australia. 1988
- Easterling, D.R., Evans, J.L., Groisman, P.Ya., Karl, T.R., Kunkel, K.E., and Ambenje, P. Observed variability and trends in extreme climate events: A brief review. Bull. Am. Meteorol. Soc. 2000 81 417–425 https://doi.org/10.1175/1520-0477(2000)081<0417:OVATIE>2.3.CO;2
- Eberhart, R.T., and Russell, W.L. Stability parameters for comparing varieties. Crop Sci. 1966 6 36–40 https://doi.org/10.2135/cropsci1966.0011183X000600010011x http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=A19667594800011&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
- Finlay, K.W., and Wilkinson, G.N. The analysis of adaptation in a plant breeding program. Aust. J. Agric. Res. 1963 14 742–754 https://doi.org/10.1071/AR9630742 http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=A19636069A00005&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
- Gauch, H.G., Jr., and Zobel, R.W. Identifying mega-environments and targeting genotypes. Crop Sci. 1997 37 311–326 https://doi.org/10.2135/cropsci1997.0011183X003700020002x http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=A1997WU90500002&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
- S. Grando, H. Gormez Macpherson (ed.) Food barley: Importance, uses and local knowledge—Proc. of the Int. Workshop on Food Barley Improvement, Hammamet, Tunisia. 14–17 Jan. 2002. ICARDA, Aleppo, Syria. 2005
- Harlan, J.R. Crops and man. ASA and CSSA, Madison, WI. 1975
- Harlan, J.R. Barley. N.W. Simmonds (ed.) Evolution of crop plants. Longman, London. 1976
- N. Islam (ed.) Population and food in the early twenty-first century: Meeting future food demand of an increasing population. Int. Food Res. Inst., Washington, DC. 1995
- Karl, T.R., Knight, R.W., Easterling, D.R., and Quayle, R.G. Indices of climate change for the United States. Bull. Am. Meteorol. Soc. 1995 77 279–292 https://doi.org/10.1175/1520-0477(1996)077<0279:IOCCFT>2.0.CO;2
- Lillemo, M., van Ginkel, M., Trethowan, R., Hernandez, E., and Rajaram, S. Associations among international CIMMYT bread wheat yield testing locations in high rainfall areas and their implications for wheat breeding. Crop Sci. 2004 44 1163–1169 https://doi.org/10.2135/cropsci2004.1163 http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000222582400006&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
- Lillemo, M., van Ginkel, M., Trethowan, R.M., Hernandez, E., and Crossa, J. Differential adaptation of CIMMYT bread wheat to global high temperature environments. Crop Sci. 2005 45 2443–2453 https://doi.org/10.2135/cropsci2004.0663 http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000233147100038&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
- Miller, F.N. Agricultural development in western central Asia in the Chalcolithic and Bronze ages. Veg. Hist. Archaeobot. 1999 8 13–19 https://doi.org/10.1007/BF02042837 http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000082168600003&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
- Morell, P.O.L., and Clegg, M.T. Genetic evidence for a second domestication of barley (Hordeum vulgare) east of the Fertile Crescent. Proc. Natl. Acad. Sci. USA 2007 104 3289–3294 https://doi.org/10.1073/pnas.0611377104
- Oosterom, E.J., and van Acevedo, E. Adaptation of barley (Hordeum vulgare L.) to harsh Mediterranean environments. II. Apical development, leaf and tiller appearance. Euphytica 1992 62 15–27 https://doi.org/10.1007/BF00036083 http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=A1992JX64800002&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
- Peterson, C.J., and Pfeiffer, W.H. International winter wheat evaluation: Relationships among test sites based on cultivar performance. Crop Sci. 1989 29 276–282 https://doi.org/10.2135/cropsci1989.0011183X002900020008x http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=A1989U078300008&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
- Rajaram, S., van Ginkel, M., and Fischer, R.A. CIMMYT's wheat breeding mega-environments (ME). p. 1101–1106. Z.S. Li, and Z.Y. Xin (eds.) Proc. 8th Int. Wheat Genetics Symp., Beijing. 20–25 July 1993. Agricultural Scientech, Beijing, China. 1994
- Russell, W.K., Eskridge, K.M., Travnicek, D.A., and Guillen-Portal, F.G. Clustering environment to minimize change in rank of cultivar. Crop Sci. 2003 43 858–864 https://doi.org/10.2135/cropsci2003.0858 http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000182540300015&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
- SAS Institute. SAS/STAT: Guide for personal computers. Release 6.04. SAS Inst., Cary, NC. 1988
- Shukla, G.K. Some statistical aspects of partitioning genotype-environmental components of variability. Heredity 1972 29 237–245 https://doi.org/10.1038/hdy.1972.87 http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=A1972N951000008&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
- Trethowan, R.M., Crossa, J., van Ginkel, M., and Rajaram, S. Relationships among bread wheat international yield testing locations in dry areas. Crop Sci. 2001 41 1461–1469 https://doi.org/10.2135/cropsci2001.4151461x http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000176236800015&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
- Trethowan, R.M., van Ginkel, M., Ammar, K., Crossa, J., Cukadar, B., Rajaram, S., and Hernandez, E. Associations among twenty years of international bread wheat yield evaluation environments high yielding international bread wheat yield evaluation environments. Crop Sci. 2003 43 1698–1711 https://doi.org/10.2135/cropsci2003.1698 http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000185174300017&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
- H.E. Vivar, A. McNab (ed.) Breeding barley in the new millennium: Proc. of an Int. Symp., Ciudad Obregon, Sonora, Mexico. 13–14 Mar. 2000. CIMMYT, Mexico DF. 2001
- Wensheng, Z., Kaneko, T., Ishii, M., and Takeda, K. Differentiation of beta-amylase phenotypes in cultivated barley. Crop Sci. 2004 44 1608–1614 https://doi.org/10.2135/cropsci2004.1608 http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000223586200014&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4